File List¶

Here is a list of all files with brief descriptions:

dir src
- dir api
  - file CATChemAPI_Mod.F90 High-level CATChem API for easy integration.
  - file CATChemNetCDF_Mod.F90 High-level NetCDF I/O interface for CATChem with MPI support.
  - file CATChem_API.F90 Streamlined CATChem API for host model integration.
  - file CATChem_HighLevel_API.F90 High-Level CATChem API for easy integration into modeling systems.
  - file FieldMapping_Mod.F90 Field mapping system for CATChem high-level API.
  - file catchem.F90 CATChem core data types and routines.
  - file run_mod.F90 Run module for CATChem atmospheric chemistry processes.
- dir core
  - file CATChemCore_Mod.F90 Central CATChem core framework with unified component management.
  - file ChemSpeciesUtils_Mod.F90 Utility functions for chemical species access and manipulation.
  - file ColumnInterface_Mod.F90
  - file ConfigManager_Mod.F90 Enhanced configuration management for CATChem.
  - file DiagnosticInterface_Mod.F90 Dynamic diagnostic system interfaces and types.
  - file DiagnosticManager_Mod.F90 Central diagnostic manager integrating with CATChem framework.
  - file EmissionConfigValidator_Mod.F90 Configuration validation for emission species mapping.
  - file ExtEmisData_Mod.F90 Module for external emission data storage.
  - file GridGeometry_Mod.F90
  - file GridManager_Mod.F90 Advanced grid management with column virtualization support.
  - file Precision_Mod.F90 Module PRECISION_MOD is used to change the precision of many variables throughout catchem at compile-time.
  - file ProcessFactory_Mod.F90 Process factory for dynamic process creation following architecture guide.
  - file ProcessInterface_Mod.F90 Abstract base class interface for all atmospheric processes.
  - file ProcessManager_Mod.F90 High-level process management following the architecture guide.
  - file ProcessRegistry_Mod.F90 Process registration system for dynamic process discovery.
  - file StateManager_Mod.F90 Unified state management module for CATChem.
  - file TimeState_Mod.F90 Time state and common time/solar functions for atmospheric chemistry.
  - file UnitConversion_Mod.F90 Comprehensive unit conversion utilities for atmospheric chemistry.
  - file VirtualColumn_Mod.F90 Virtual column data container for CATChem processes with macro-generated meteorological fields.
  - file chemstate_mod.F90 Contains the ChemStateType data type and related subroutines and functions.
  - file constants.F90 Physical and mathematical constants for CATChem.
  - file error_mod.F90
  - file init_mod.F90
  - file met_utilities_mod.F90 Meteorological utility functions for CATChem.
  - file metstate_mod.F90
  - file species_mod.F90 Modern species definition and management for CATChem.
  - file state_interface_mod.F90 State interface module for CATChem.
  - file utilities_mod.F90 General utility functions for CATChem.
- dir external
  - dir yaml_interface
    - file yaml_interface_mod.F90 High-level Fortran interface for yaml-cpp.
- dir process
  - dir carbchem
    - file CarbChemCommon_Mod.F90 Common types and utilities for carbchem process.
    - file CarbChemProcessCreator_Mod.F90 Factory for creating carbchem process instances.
    - file ProcessCarbChemInterface_Mod.F90
    - dir schemes
      - file CarbChemScheme_GOCART_Mod.F90 GOCART carbon species chemical production and loss scheme.
  - dir drydep
    - file DryDepCommon_Mod.F90 Common types and utilities for drydep process.
    - file DryDepProcessCreator_Mod.F90 Factory for creating drydep process instances.
    - file ProcessDryDepInterface_Mod.F90
    - dir schemes
      - file DryDepScheme_GOCART_Mod.F90 GOCART-2G aerosol dry deposition scheme.
      - file DryDepScheme_WESELY_Mod.F90 Wesely 1989 gas dry deposition scheme.
      - file DryDepScheme_ZHANG_Mod.F90 Zhang et al.
  - dir seasalt
    - file ProcessSeaSaltInterface_Mod.F90
    - file SeaSaltCommon_Mod.F90 Common types and utilities for seasalt process.
    - file SeaSaltProcessCreator_Mod.F90 Factory for creating seasalt process instances.
    - dir schemes
      - file SeaSaltScheme_GEOS12_Mod.F90 GEOS-Chem 2012 sea salt emission scheme with observational constraints.
      - file SeaSaltScheme_GONG03_Mod.F90 Gong 2003 sea salt emission scheme with improved sub- and super-micron treatment.
      - file SeaSaltScheme_GONG97_Mod.F90 Gong 1997 sea salt emission scheme.
  - dir settling
    - file ProcessSettlingInterface_Mod.F90
    - file SettlingCommon_Mod.F90 Common types and utilities for settling process.
    - file SettlingProcessCreator_Mod.F90 Factory for creating settling process instances.
    - dir schemes
      - file SettlingScheme_GOCART_Mod.F90 GOCART gravitational settling scheme.
  - dir so4chem
    - file ProcessSO4chemInterface_Mod.F90
    - file SO4chemCommon_Mod.F90 Common types and utilities for so4chem process.
    - file SO4chemProcessCreator_Mod.F90 Factory for creating so4chem process instances.
    - dir schemes
      - file SO4chemScheme_GOCART_Mod.F90 GOCART SO2 to SO4 production scheme.
  - dir wetdep
    - file ProcessWetDepInterface_Mod.F90
    - file WetDepCommon_Mod.F90 Common types and utilities for wetdep process.
    - file WetDepProcessCreator_Mod.F90 Factory for creating wetdep process instances.
    - dir schemes
      - file WetDepScheme_JACOB_Mod.F90 Jacob et al.